rs37816787 SNP Detail

Summary

• ID
  rs37816787
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:137177946 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCAGAGTA CGGGGTAGGA TAGGATGAGG
  GAAGACATTT CAGAGGCCAA AGCCTTCCAA GAAAGGGAGG AGGCTCTTTG TCACCAGGTA
  AACTGTTTGC TTCTCTACCC TGGGCTGAGA GAAACTCCTT TCCTCATTAC TGCCGCTCAG
  S
  TGCCTGGACA GCTCTTCAAG GCATATGTGT TTCCCTTTGA ATAGGATGGC TTCTTTGATC
  CTGATTCTGT GTATTGTTAT TACACACAAG AAATAATAAA TCAAACATTT CTACTGTGGG
  AGAGCATTAT ATTTGTAAAA TTTACTTTTA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51382490	NES14469110	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	C	C	C		G	C	C	G		G
ss319998158	CHEV_1_139146785	CHEVERUD	SCREENING_POP	f	SNP										G					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37816787					SNP	C	C	C	C	G	C	C	C	C	G	G	C	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51382490	NES14469110	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:137177946 () rs orientation: forward

Symbol	Name	Function Class
Gm19215	predicted gene, 19215	265 bp downstream
Gm37057	predicted gene, 37057	1934 bp upstream