rs37818044 SNP Detail

Summary

• ID
  rs37818044
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54567602 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCATCTT CATATATGAT
  CAAGGTCAAG GAAGAAGTCA AGGTCATCTT CAATTGCACA GAGAGACACA TTGAAAATCG
  GAGAGCGTCA ACAATTTACT CAATGTTGCT CAGAAAGCAG GCGATAGAGC TGACACTCTA
  ACCCTGGCTT CCAGTCCCTG TCTGTCCTGC AGGGACCTCC TGAACCTGTG CTCCTTCCCA
  Y
  GACAGAGTCC TTTGCTGCCC AAGCTGAAGA TGGCTCCCAG GTTTGACCAC CTCTATCTGT
  GTTATCAGTG AGGCAGACCT AGAGCCTGTG AGCTCAGATG TTCAAAATTC CTCCCTATTG
  GCTAAGTCCC TGTCAACATA GACCCGATAC ATGGACTTCA GCAAACACTG GAGCTACTGA
  CCCTATGCAG AAAGAGATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52018251	NES15041871	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37818044					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52018251	NES15041871	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54567602 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	within coordinates
Rr206444	regulatory region 206444	998 bp proximal
Tssr89653	transcription start site region 89653	1348 bp downstream
Tssr89654	transcription start site region 89654	1526 bp downstream
Tssr89655	transcription start site region 89655	1566 bp downstream