rs37821652 SNP Detail

Summary

• ID
  rs37821652
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117526368 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCGTGAGT GTGAACAAGA
  ACCAAACAGG CGTCTACTTC CTAATCTAGT TGTTAGGGCC ACTGTTGGAC CCTTAGGACT
  GATTTGCTTT CTAGGAAAGA CATCAAGTAG GTGGGTTGTC CATGGTCTAA AGATCCAGAA
  TTGGAGAAGA TACAAAGTCA ACTTGACACC AGAGAAGCTA AAGCACAGAG AATCTCAGTG
  Y
  TCTGACTGCA ATGAACAGTG GGGTCTCAGC CCCCACAGGG CAGCACCATG CATGTGTGAC
  ATCAAAACTG ACTCCTCCTG GCAGTGACCT CGCCCCATGT GTCAGTCATC TTTCCGTTAC
  TGGAACAAAC TACCTAGGAC TGTCAGCCTA TGGGAGGAAA GGTGTATTTT CTTCAGATGT
  TTCAGTGCCT CGTCACATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51407767	NES13703907	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37821652					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51407767	NES13703907	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117526368 () rs orientation: forward

Symbol	Name	Function Class
Rr379983	regulatory region 379983	59 bp upstream