rs37829192 SNP Detail

Summary

• ID
  rs37829192
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:19915957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGACATTAT GACTTCGATA
  ACAATCTAAA CGTTTATAGT CAAAACAAAC ATTTTAATGT AGTACATACA TTTATCATAT
  ATAATATTTG CCTGCTTTTA TGTGACACTA TATTTTTATA CGATATTAAC ATCCACAAGT
  TAAACACAAT TTAGAGTTTA GATTTTGGTC TTTTTCAAAT CTAAGTATGT GACTTAAGAT
  Y
  GAAACTAATT TAAAGTAGTT TTGAAATTTA TATGAATTTC GAATTTTATT TGAAACTAAC
  TGGGCCTAGA TTATGGCACA TTTCCATGGC TTAACTGGGT CCCTCCTGAG GCAGAGGAGA
  ACGTTTGGAG AAAGACAAGT AGCTCTGCTG TTAAGCCACT GCTTTAACAA TGGAACAGGT
  AATTAAACTT CACTCTAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51072349	NES14365036	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37829192					SNP	C	C	C	C	T	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51072349	NES14365036	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:19915957 () rs orientation: forward

Symbol	Name	Function Class
Gpr141b	G protein-coupled receptor 141B	within coordinates
Tssr121608	transcription start site region 121608	943 bp downstream
Tssr121609	transcription start site region 121609	1013 bp downstream
Tssr121610	transcription start site region 121610	1142 bp downstream