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rs37829375 SNP Detail
Summary
  • ID
    rs37829375
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr7:131427552 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TTTCTCTTCT GCCCTTCTCT
    CTCTTTGCCT CCCTTCATCT CTCCTCTCTC CTTTCCCCCT TCCCTCCCTT CCTACCTTTC
    TTCTTCACCT CTTCCCTCTT TGGGGAGGTA GAGACATGGG GGAGAAGCTG GATTCCTTTC
    GAGTCGGGGC TTACAGAATG GTTCTTTGCT GTGGTCTAGG GACCTCCGAT CAGAAGCGTC
    Y
    GGCAGGTTAC GGCAGGTCGT TGGATGCACA CCTGGAAGCT CTCAGCTGAC CTCTGCATCC
    AAGCAGCAGA TCGTGGACAA GCCCTGGGAA TGAGCATTTT CACAGATGCC ATGGTTTCTA
    GGCACTGTTA GGTGCCACTC AAACAAGCAT ACTCTGTCCT TCCAACCCAG TCCTAAATTT
    GTTTCAGGTG CCCTCCCATC                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss51932564 NES14951379 PERLEGEN MM_PANEL2 f SNP T T T T T T C T T T T T T T T
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs37829375 SNP T T T T T T C T T T T T T T T
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss51932564 NES14951379 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr7:131427552 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm34645 predicted gene, 34645 within coordinates
Gm44546 predicted gene 44546 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory