rs37829722 SNP Detail

Summary

• ID
  rs37829722
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:139014148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGGGGTGA CCACCAAGGA
  CACTGGGATG TGTGGAGTGG AGCCAGCATA AGTTTACAAG GCAAGCTGTG AGTGCTGACA
  GGAGCAGGGC GGGGGAGGTG GAGCTGCTTC CTCTGTACCC CAGAGCACTG TAAGGGCTTG
  ATGACAGGCA CGGAGCTGTT TACATTTGTT TCAGTCTGAC TGTTCCTATG TCCTGGATAC
  S
  TTTGGCTAAT GTTTTAATCA CGGCAGTAGA AACCAAACTA GGCCACTCAC TGAAAGATTA
  GAGCATGTCT CATTAGGGAG GGATTTAGGG ATGCTACTAA GGTAAGCCAT GGAAGGAATC
  GTTTCTTTTG GTAGCTTTGC TTTGATGTCC TGTGGGTCCA GGATATTGTC ACTGGGGAAG
  AAAGTAGCCG CCGCTGTTCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51042022	NES13901091	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37829722					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51042022	NES13901091	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:139014148 () rs orientation: forward

Symbol	Name	Function Class
Rr586258	regulatory region 586258	within coordinates
Stpg2	sperm tail PG rich repeat containing 2	Intron