rs37829851 SNP Detail

Summary

• ID
  rs37829851
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:73966565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTCTGAA GGATTGGCCT
  CTCCTACCCA GCCCTGGGGA TCCCATTTGC TCCCTGTCTG GCTCCCTCTG ATGGATTCCA
  GTAGCATCTG TCTATCATGA TGCATCCCTG GTGGATTGCA TGCTCTGAGC TGCCCTTCTG
  CCTACATCAT GCACCCTAGT CCTCTGCCCC TGACCTACAT CTTCACCTTG GTGCATCCTG
  M
  CATCCTTCTG GGTTCCTGCT ATATATCACC ATTCTTCAAC ACACACACAC ACACACACAC
  ACACACACAC ACACACACAC ACACACTTCC CTGGCTAGAA GTAACTGTCC CTGCTTTGTG
  CCCCCAGATA CTGTGTTTCT GGTCCATGCT GTGCACAGGT GGCACCTGTC TATGCACACC
  ACTCAGGTCT CTGAAGAATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51276658	NES14517884	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37829851					SNP	A	A	A	A	A	A	A	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51276658	NES14517884	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:73966565 () rs orientation: forward

Symbol	Name	Function Class
Tns1	tensin 1	within coordinates
Tssr117	transcription start site region 117	1089 bp downstream
Tssr12216	transcription start site region 12216	1098 bp downstream
Tssr12217	transcription start site region 12217	1911 bp downstream