TGCTT GCTGCTACTG CCGCTGCCTC Y AGAACAGAAT CTTGAGAGCT AGCGG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss52018331 | NES15030495 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | T | T | C | C | T | C | C | C | T | ||
ss322965386 | CHEV_9_54476542 | CHEVERUD | SCREENING_POP | f | SNP | C | T | |||||||||||||||
SNP Consensus Information | ||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs37831066 | SNP | C | C | C | C | C | C | T | T | C | C | C | T | C | C | C | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss52018331 | NES15030495 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr9:54536019 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Acsbg1 | acyl-CoA synthetase bubblegum family member 1 | within coordinates | ||||||
Rr195671 | regulatory region 195671 | 182 bp proximal | ||||||
Rr195672 | regulatory region 195672 | 1182 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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