rs37835493 SNP Detail

Summary

• ID
  rs37835493
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:34999461 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAAAGAAA AAAAAAAGAT
  TCTGACAGAG GAGAAAGACT GAGGAAATCA CATAGAATTC AGCTCTTATA AGGATAGGTA
  TTGAATCTGT GAATATCTTT TTCCTTTAAA ACATCTGAAT TTAAGTCTAA AGCCAAAATT
  TTTTCTCCTT AAAAAATTAC TTTTCCTTCC TTATAAACTC TTTAGCAGTA GGCCAGTTAC
  R
  ACTACAGATC AATTTATCTT CTCATCAACT TCCAATAAAT CCCTTTGCTT AACAACACAA
  TTGAGTCCTC CCTATCAATT CAATAAAGAA TTTAAAATGA AAAGCATTTT TCCTGCAATA
  GTGAAAAGTT GAATACAAGA TGGAAGCCAG GACCACTGCT TTCCCCCATG AACTTAGCAA
  TCTCATTTAA GTCGGCCGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51277967	NES13784246	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37835493					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51277967	NES13784246	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:34999461 () rs orientation: forward

Symbol	Name	Function Class
Cnot4	CCR4-NOT transcription complex, subunit 4	within coordinates
Rr628441	regulatory region 628441	760 bp proximal