rs37838206 SNP Detail

Summary

• ID
  rs37838206
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45512798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAAAGCAG GGAGGGAAAG
  GGGGAGCCCC CCAATCTCAC AGCCCTATGG GGTTTATGTT GGCAGAACTA CAGAGTATAA
  GCAGCCAAGG ACTCCGGCTG ACCCCTGGAT GCATAGCGCC CAGCCCTGCA CAGCAGCCAG
  AGGATAGCAA GAGCAACCCA CTATCCCTCT CAGACTTTAT ATCCCATGCA TCAATGGGGA
  R
  CAGAAAATCC ACAGACCACT GCTGCCCTCC TCAGCCCAAG ACAGCTGCCT AGAAGGTGCC
  ACATTGTGAG ATTGTGGGTG GGTTCTCTGG AAAGAGCTGG GAAGTACCCC TGAGGAGACA
  GGGAGGGGAA GACACAAGTT ATCTTAAGGG ATGCAGGGTG GGGGTGGCAC ATACAAGGAA
  GAGGACTCAG AATCAAGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52012067	NES15026844	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A	A	A	A	G	G	A	A	G	A
ss136415434	ENSMUSSNP2537579	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37838206					SNP	G	G	A	A	A	A	A	A	A	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52012067	NES15026844	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45512798 () rs orientation: forward

Symbol	Name	Function Class
Dscaml1	DS cell adhesion molecule like 1	within coordinates
Rr195123	regulatory region 195123	within coordinates
Rr200398	regulatory region 200398	1998 bp distal
Rr200399	regulatory region 200399	198 bp distal