rs37843761 SNP Detail

Summary

• ID
  rs37843761
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:44840419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGGCTCA GCCCTCCAAC
  CCTGTGATGC TGCCCACTAT GATCAGCCTC CTGGCAGAGG TGGGTGTACA GCTGCTGTCC
  TACCAAACCT CCATGGTGTC TGACAGAGAG CCCTGGCACG TCATGGGCCT CTCCTCCCTG
  CTGCCCAGTC TGGAAACATG GAAGCAGCAT GTATTGGAGG CTTTTCAGTT CTGCTTCTGA
  M
  CCTGGGGCTC AGCACTCTCA GCCCTACAGG CTCTTCTGAA GAAACCCACT CACTGTGACC
  TATAGGGAGA GGTGATACAC AGAACCAGGC TATCTGCATG AAATAATATC TAGTAAAGAA
  TCTTAGGGGG CTGGCGAGAT GGCTCAGCGG TTAAGAGCAC TGACTGCTCT TCCGAAGGTC
  CTGAGTTCAA ATCCCAGCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50798003	NES13526943	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	C	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37843761					SNP	C	C	C	C	A	C	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50798003	NES13526943	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:44840419 () rs orientation: forward

Symbol	Name	Function Class
D19Mit27	DNA segment, Chr 19, Massachusetts Institute of Technology 27	1017 bp proximal
Gm5246	predicted gene 5246	4 bp downstream
Rr394467	regulatory region 394467	1306 bp upstream