rs37849947 SNP Detail

Summary

• ID
  rs37849947
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40991518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGA GAGAGAGAGA GAGAGAGAGA GATCTCCTTT GAGCAGTTTC AGGAATCTCT
  S
  CCTTCAATAA AATTACCTTG GACCAAGCCA TTGTCCTGCT TAAAATCCTT TAGAACTTCC
  ACATCCCTGC TTGCTTCCCC TGCTCCCTGC TAGCAGAGCA                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss50702333	NES14262517	PERLEGEN	MM_PANEL2	f	SNP	G	C	G	C	C	C
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37849947					SNP	G	C	G	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50702333	NES14262517	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40991518 () rs orientation: forward

Symbol	Name	Function Class
Rr206246	regulatory region 206246	117 bp distal
Ubash3b	ubiquitin associated and SH3 domain containing, B	within coordinates