rs37854154 SNP Detail

Summary

• ID
  rs37854154
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:59377068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGCACTT CTGAGGAACT
  GGCTTCCAGA AGCAAGTTCC CTTGGGAAAC TCTGCAGGCA GCTTAAACCT CAAGAAAGCT
  ACTCATTAGG ATCGTGGGGA GCTGTTAATT GCCCTGTCCA GCCAAGACAC AGTGTGGCCG
  CGCCAGCCTG CTGAACAATA ATGAAGTCTG TAGAAGCTGC AGACCCAGCT CGGGCTGCCT
  R
  GGATCCCTCC TGCCTTCTCT TCATTCTCTC ACCACAGACA CTATGCCCCC TGCTGTCCTG
  CTGCCCAGAG ACCCTCACTG CAGCCTTCAA ACAGAACCGC TCCCCTAGGG ACCCTCTCCC
  CTTGTCAATC ATATTCTCCA AAAGAACAGG CAGGGATGCT GAAGCCCAGC AAAGGCTTGT
  TTAGCCGCGT TGTCAGTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50898707	NES13494808	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37854154					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50898707	NES13494808	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:59377068 () rs orientation: forward

Symbol	Name	Function Class
Gm33756	predicted gene, 33756	827 bp upstream
Rr370546	regulatory region 370546	587 bp upstream