rs37856012 SNP Detail

Summary

• ID
  rs37856012
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:35702420 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAGAAGTA AACTATCCGA
  GGACATGCTT TTGTAGCTAT TGAAAATCTT ATATTGAAAC CCACTGATGG TGAAACTGTA
  GATCTCCTGT GATTTAAGTA CCATCTGGTT GTGCTCATGA CTTTAAAGCT GTTATCTCCA
  CATAAAATTT CAGAGTCCTA TATTTTTTTC CACCAAACTA TCCATTTTTA AGCCACAAAT
  R
  TTTTCCCATC TCTTCCAGAT TTTATCTAAA AGTATATTTT AACAATATTT TAAAAGTTCT
  TAAACAATAA CAATTTATCT TGATGGATGG CATGCTGTGG TTTTTTTTTT CATTTTATTT
  TAATTAGCCA TTGAGGAACC AAATTCCCTT TTGTCTTTAG TATTTGGAAT ATTGTTTAAT
  TATTGTTATC ATGCCAGATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	C3H/HeJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51633319	NES14588590	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	C3H/HeJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37856012					SNP	A	G	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51633319	NES14588590	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:35702420 () rs orientation: forward

Symbol	Name	Function Class
Rr647	regulatory region 647	within coordinates
Rr309492	regulatory region 309492	856 bp distal
Vps13b	vacuolar protein sorting 13B	within coordinates