rs37859804 SNP Detail

Summary

• ID
  rs37859804
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:42266472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCTGGAA CAGCAGAGAT
  GGGTACATCT GGTTTGCCTT CCTCTGTCTG GTTTCTACCT GTTCTCCTGC CATTCAGGAG
  CAGTCGGGAG CTGGGGTGTG TTTCTCCTTC CACAGAGGGA AGGAAGTCAG CCCTTAGCTT
  GGAGGGGCAT CCAGCCACTC GGAGGGTAGG AGTTTTTGTT GCTGCTCTGG GACTGGCCAT
  K
  CGAGAGGAGC TACCTTTATG ATAATGAGAG GCCTCAGTTG GATTTTCTTC TTCCTCACAA
  ACTGGTGTGG TGGCATGGAT GGGCTCTGAG CAGAGCTCCC TAGGAATGGT GGCAGATTCT
  CCTTGCTCCC CTCCTTGCTA GCTCCTGACC TGCCTCCTTA CTCCCAGCTG CCCAGGGGTC
  TCCTAGAGAG GGTGCCTCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50818831	NES13546251	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	T	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37859804					SNP	G	G	G	G	G	G	T	G	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50818831	NES13546251	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:42266472 () rs orientation: forward

Symbol	Name	Function Class
Gm34347	predicted gene, 34347	1617 bp upstream