rs37863546 SNP Detail

Summary

• ID
  rs37863546
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:82119111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAATACGTT TATGGCTGAG
  GAGGAGCTGC AGAAGATGAA CGATTAGCAG AGGAACACCA GTGAAGCCAA GACCTGGGTG
  GAGAATGGCA CTTAGTGGAG GGACTGCAGA GATGCCAGGC AGTGCAAATC CACCCTTGAC
  CGATCTTCCT CCTCTGAGGG TCACTGCTGG TTGCCTCCAT AAGGAGGGAC CTGGATGGCT
  R
  CTGGGGACAG AGAGAACCTC GGGACTTTTC CGTTATTGCT GGGGTCAGTT GTGAGCTCCA
  GTTAAAGGGA CTTCTGTAGT AATGGCCTCC TTGTTCAGGG GAGGGCTGCT CTGAAAACCC
  ATGAGGCCAA ATTCTGGTTC TGTTTGCAAG CCTGTAATGG TGGGTTTCTA GGCTACTCTT
  GGGTTTCCTA CTGCCTGATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51027289	NES14388223	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37863546					SNP	A	A	A	A	A	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51027289	NES14388223	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:82119111 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4836	CpG island 4836	409 bp proximal
Gm30799	predicted gene, 30799	within coordinates
Rr257877	regulatory region 257877	490 bp proximal
Rr268520	regulatory region 268520	690 bp proximal
Tssr3883	transcription start site region 3883	1044 bp upstream