rs37864535 SNP Detail

Summary

• ID
  rs37864535
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:64440838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAATATTCA CTTTAAATTT
  AATAGGACTA AATTTATTTT GATACAAGAA GAAGCTTTCT AGAAGAAGTT TTCTTTATTT
  TCAAAACTGA TAGCAATTTC AGGAATTGGA AATACAAGTG AGGGATTGAA TTACCTAAAA
  AGCATTCAAA TGGGTCCAAT ACAAGTATGC TTCACAAACT ATTTTAGAGC TGGAATAATA
  Y
  ACAAATGGAA TAGGAAACCA AACAGTATGA TGTTGATTCT GATTATGACG GTAAATTTCC
  TTTTCATCTT AACAAGGTGT TTTATAGTTT TCAGTTTCTT ATGCATGCAA TAGACTAGGA
  TAGCAGTTCT TTGGTGCCTA TGGCATAAAT GTATACCATG CTCATAAAGA ACTATCTTCA
  ATAAAGCTGA GAGAGTAATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51323165	NES13758825	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37864535					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51323165	NES13758825	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:64440838 () rs orientation: forward

Symbol	Name	Function Class
D6Rck360	DNA segment, Chr 6, Rockefeller University 360	1959 bp proximal
Grid2	glutamate receptor, ionotropic, delta 2	Intron
Rr379493	regulatory region 379493	387 bp upstream