rs37868706 SNP Detail

Summary

• ID
  rs37868706
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:143340540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGGCGAAG GAATCCTCCT
  GCCGTTTGAG GAAGTACAAG TGCGTTTTCA GATTCCATCC GGTGAAGCGT TCCGTTCTTA
  CCGAGGGTCA GGCCAGGTGG GCCACCGTCT GTAAGGCAGT ACACAGTGAC CTGTCCACTG
  TCCAGGGCTG CTCCTGCTCC ACCTTCCTCT TTGTCTATTT TCCAGTTTAA TGAAAACACA
  R
  CTCAGAAAGA TAAACTTCAT GCCAATCCCA TGTCAGGAAT GACTCTTGAA AATACTTACT
  TTATATTATT ATCATCATCA TTTATTAATG AATTTATTTG GTATGCCTCC ACAACATGGG
  TGAGGGGCTA CTAACACTGT ATGTATGACA TCCAAACAAC TGCATCACTG CCAAACCCCA
  CCCGATCACT GACGACAGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51458229	NES13996296	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37868706					SNP	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51458229	NES13996296	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:143340540 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18149	CpG island 18149	45 bp distal
Gm67127	predicted gene, 67127	within coordinates
Rr640842	regulatory region 640842	687 bp distal