rs37883855 SNP Detail

Summary

• ID
  rs37883855
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66118079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTGTGATC TGAGTACACC
  GACACACACA TTCACATTTG GGTTGTGATC TGAGCACACC GACACACACA GGCACATCTA
  CCCAGGGTGA GTTTTGGGAG TGTAGAACCT TTGTCTCTAA GTAGTTTCTT TACTTGCCCA
  ATGTTTGCCT AAGCTTGTTA CTAATTTTTT TTTAAGTCAT TAAAATGTGA ACATGTTACT
  Y
  AGAGAAGGGA TTAGGTTAAC TCTTTGGAGT CTCCTGTCAA ATTATATGCA GTGTGGAAGA
  ATTGAAGGGT TTTCCAGAGA GCCTGCCTGC ATGAGAGGGG AGGGTGTGCA GGTTGGGAGG
  GAGGTATTCA AGAAGATAAA CTGAGTGTGT TAGCATTTAA GGAGAGATGA CCTTATATTC
  CACAGCAACA GGCAAAGTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50723223	NES14247846	PERLEGEN	MM_PANEL2	f	SNP	T		C	C	C	T	C	C	C	T		C	T	C	C		C
ss136573605	ENSMUSSNP3122550	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C						C
ss322988307	CHEV_9_66058604	CHEVERUD	SCREENING_POP	f	SNP											T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37883855					SNP	T	T	C	C	C	T	C	C	C	T	T	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50723223	NES14247846	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66118079 () rs orientation: forward

Symbol	Name	Function Class
Dapk2	death-associated protein kinase 2	within coordinates
Rr401473	regulatory region 401473	1332 bp upstream
Rr681677	regulatory region 681677	647 bp proximal
Rr681678	regulatory region 681678	1385 bp proximal
Rr681679	regulatory region 681679	1907 bp proximal