rs37889358 SNP Detail

Summary

• ID
  rs37889358
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:114969021 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTGAGAC AGACCTTGAA
  TAGCCATGAA TTATTTGTGG AAAGGTTGAA AAAGGCTTTA AAGGTGTGAG GGATGAAGGT
  TAAAATACAT GATTGGCTTG CATTTTTTTA TTTTGTTTAA GAGATTTGCC CATGGTTTCC
  CCCTTGAAGG TATCAATGCT CTTAAAAGAA TGGGAGCACG ATGGTGGTAG CACTTTTCAA
  R
  ATTATTACAG AGAGTTGGGC CAGCAGTGAA TAATTGTTTG TTTGTTTGTT AGGTGTTTTT
  TTGGTTTTGG GGCGTGATTT TTTGAGGTTT TTTTTCTTTC TTTCTTTTTT TTTTTTTTTT
  TTTTTTTTTT TTTCGAAACA GGGTTTCTCT ATATAGCCCT GGCTGTCCTG AACTCACTTT
  GTAGACCAGG CTGGCCTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51008718	NES13917018	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37889358					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51008718	NES13917018	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:114969021 () rs orientation: forward

Symbol	Name	Function Class
Rr375604	regulatory region 375604	1902 bp upstream