rs37890768 SNP Detail

Summary

• ID
  rs37890768
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51115335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGGCCTT CTGTTCTCTC
  TTGACACTGA GCAAAGCACT TGTCATAGCA CAATCAACCC TCCAAGTGTC TGTCTTCTTA
  ATCACAGAAT TGGAGAACGG ACACAGGGAT TGACATAGTT CTCCCCCGAG GGTTCCCCAC
  CTAGCCCTGC TGCTGACTGC ACGAAGGACA GCAAGCCTTC AGTAAAATAA CCCAGCCTCA
  Y
  GTGACTGCCA GCGTGAGCAC CAGTGTGAGG TCTTTGCCGA GCATCAACAG GAAAGACTGG
  ACCCAACTGT GTGCACAACA GTGAAGTTAA AATAACACCT CCCCAGCGCC CCCTCCCTCT
  CATTTTGAGA CAGGGTCTCA TGTAGCTCAA GCTAGCCTCA AACTTAGCAT AGAGCGAATG
  ACAACTTTAA AGTCTGATCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ
ss51524042	NES14689587	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ
rs37890768					SNP	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51524042	NES14689587	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51115335 () rs orientation: forward

Symbol	Name	Function Class
Rr576240	regulatory region 576240	965 bp distal
Rr576241	regulatory region 576241	1755 bp proximal