rs37895594 SNP Detail

Summary

• ID
  rs37895594
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:44842449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAAACAGA GTTACAGGGA
  AACGACTCAG GGCATTGGGA GATATATACT TCTGCCCCAG TCTTCTACCC ACTACATTTG
  TATTTCAGTA TGATTGGTCC TTATAATTCT TCAACTGAAT AATAGTAAAA TACCAAAGCA
  TAATAATCCC ATAATATGGC AAAGATGTTT CCCCATAAAG GGGCAAGTGA AGATGTAGGG
  Y
  GGTAATGATA CATTCTAGAA ACAAGATAAC CATGTCACAA TTTACTAATA TTAGCCAGGA
  AATGATGGGC CAATGCTACA AGTTAACAAC TGACAGTGTA ATTGAGTAGC TCAGTGGTGA
  TGTAATGGAT ACAATGTCAT GATGGAAGAT ACAGTACTAA TGTCTCGTGA CATAAGATAG
  TCTCAAAAAC AGTGGAAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50797989	NES13526759	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37895594					SNP	T	T	T	T	C	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50797989	NES13526759	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:44842449 () rs orientation: forward

Symbol	Name	Function Class
D19Mit27	DNA segment, Chr 19, Massachusetts Institute of Technology 27	839 bp distal
Rr394467	regulatory region 394467	within coordinates