rs37914854 SNP Detail

Summary

• ID
  rs37914854
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:78181532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTTTGGG TGCTTATGGA
  CGGATGCCCT GCAAGTGATG CTCTGGTGTG ATCTTTCTTC CCAACTTCCC TAGAGTTGAC
  CTCTAGGACA CTTGAGGTCA CCCCCATTTG AACTCCATCT GTCCAACACC ACCCTGGCAA
  GTCATGCCCT CCTGGTGTCT TGAGTTTAAA CTGTAGAGAC TGAAATTTCC TCACTTCCAT
  W
  AGAATTAAAG GGAGTGTGTG TCAGGACCCA AACCCACAAT AATGACCTCC AAAGGCCCAG
  TGGGTGATTG TGACCTGAGA ATCTTTCTTC CTGTATCCCA AGGGACACTT CATCTGTTCC
  TAGTTGACTG TTCCGGCGTT GCAACCCAGT TATAAACACT ATATGGAGCC CAGCTTTGGA
  AGTTCAGCTT CCAGTCTATC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51284804	NES14519459	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37914854					SNP	T	T	T	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51284804	NES14519459	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:78181532 () rs orientation: forward

Symbol	Name	Function Class
Cpgi455	CpG island 455	689 bp distal
D1Mit215	DNA segment, Chr 1, Massachusetts Institute of Technology 215	1464 bp proximal
Gm33152	predicted gene, 33152	1844 bp downstream
Rr370614	regulatory region 370614	947 bp downstream