rs37916330 SNP Detail

Summary

• ID
  rs37916330
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27751487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACGCTGAT GAAACCTACC
  CGCCTGTTTG CATGATGAAA TCCTCGTGGC TCACTACTTC CCTCCCAATC CTCGCGCCGC
  TCCCACCCAC TTTTGCGCTT CTCCCCTCCC CGGTCTCCTC CCCCAACTAC TCCTCTTACA
  ACTCAAAAAC AAGAGGAATC CTGGCGCGGT GATGAACCTT GGGCTACTGC TGGCGCAGCC
  R
  GGCCACATGC CTATTTTCTC GGGCAGCTGT CCCTGCACCA GGGAGCACAG CCAGATCCCA
  GAACCAAGGC ACCGATGAAG GGATCTTGGA GCTCAGTCAG TGTCCACTGG GTTCTGTGAT
  CTTCAGGACA CAGCACCAAG GCCTCGCTGC TTGAGCACGT GTCTGTTGTG CATCGTCATG
  CTGAGTTCCT ACACTCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51947117	NES14964419	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37916330					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51947117	NES14964419	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27751487 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	within coordinates
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	within coordinates
Rr186444	regulatory region 186444	within coordinates
Rr186445	regulatory region 186445	1713 bp proximal
Tssr76776	transcription start site region 76776	1127 bp downstream
Tssr76777	transcription start site region 76777	1089 bp downstream
Tssr76778	transcription start site region 76778	1041 bp downstream
Tssr76779	transcription start site region 76779	997 bp downstream
Tssr76780	transcription start site region 76780	950 bp downstream
Tssr76781	transcription start site region 76781	26 bp downstream
Tssr76782	transcription start site region 76782	1287 bp upstream