rs37925154 SNP Detail

Summary

• ID
  rs37925154
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:15338582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAGCCTCT ATACAAAGTT
  AGTGAAGGCT ATCAGTTAAA AGAAGCCTTT ATTTTGTTCC CCTTACAGCA CTGTGCCTAT
  AGCACTCAAA GTCTTCAAAG ACTACAGAAT CGAAGACAAA AGGCTCAGAC ACTCCCACCA
  CTCAGTCTGC TTTAGAAGCT TTTAGAAGTT TCCAGAACTG CCACTTCACC ATCAGAAAAC
  Y
  TTGTGTGTCC ACAAAGTTCT TTCTTTCTAG GACTACACAT GATTATTTTA GATTTCTGTT
  GGAAATATTT TAAACATCAG ATATGCCTTG ACTTTCAATT TGATGATTTC AATTTCAATG
  TATATTTAAA ATGTAGAATG GGAACAAAAT ACCCATGAAA GGAGTTACAG AGACAAAGAT
  TGGAGCTAAG ACGGAAGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50645660	NES13623988	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37925154					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50645660	NES13623988	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:15338582 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10647	CpG island 10647	1131 bp proximal
Pomc-ps1	pro-opiomelanocortin, pseudogene 1	1117 bp upstream