rs37926073 SNP Detail

Summary

• ID
  rs37926073
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:92133411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGAAAGCC AACCAAAACA
  ACAAAAAGAG TTCTCACTTT TGAATCAGTT AATATAAGCT TGATAAAGTA CCAAGTGGAA
  AGGTGGAAAC TAGCTTTTAT TATATCAAAT ACTTGACACA GCCCCCATCC CTACAACTCT
  CCCCATGGTT CCTGCGTGGC TTGATTTCCG TAATCTTATT CCTGGAAGTT AGGTAGGGCC
  R
  TCTCTCTGTT CCAAGACAAA CAATTATACT TTCTTCCCAA ACAATTACAC TCTCTTCTTC
  CGGCTTAGCG GCTTAGCAGT TGGAACTAAA TACTGGGTAC CAGGAACCAG GGAAGCTTAA
  TAAAAAGCAC CCCCGGGCAC CTGGGGGCGT TTCCTTCTTG GCTTTTCCTA ACAACAGAGC
  TTTCTACCTG GATACTTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	NZW/LacJ	PWD/PhJ
ss52034767	NES15054954	PERLEGEN	MM_PANEL2	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	NZW/LacJ	PWD/PhJ
rs37926073					SNP	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52034767	NES15054954	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:92133411 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22145	CpG island 22145	602 bp distal
Gm67683	predicted gene, 67683	841 bp upstream
Plscr1	phospholipid scramblase 1	within coordinates
Rr206878	regulatory region 206878	within coordinates
Rr383753	regulatory region 383753	within coordinates
Rr401603	regulatory region 401603	1537 bp upstream
Tssr86494	transcription start site region 86494	1691 bp downstream
Tssr86495	transcription start site region 86495	1669 bp downstream
Tssr86496	transcription start site region 86496	1629 bp downstream
Tssr86497	transcription start site region 86497	1605 bp downstream
Tssr86498	transcription start site region 86498	1324 bp downstream
Tssr86499	transcription start site region 86499	1298 bp downstream
Tssr86500	transcription start site region 86500	1290 bp downstream
Tssr86501	transcription start site region 86501	1260 bp downstream
Tssr86502	transcription start site region 86502	1231 bp downstream
Tssr86503	transcription start site region 86503	1171 bp downstream
Tssr86504	transcription start site region 86504	1084 bp downstream
Tssr86505	transcription start site region 86505	1047 bp downstream
Tssr90887	transcription start site region 90887	872 bp upstream
Tssr90888	transcription start site region 90888	830 bp upstream