AAATTCTCTC CAATCCAAAC TGGCTTGAGA TGTGGATGAG AGAAACCCCA GCAGCTTAGC AGTCTTTTCT TATCTCGATC GGGGCCTGGC CCCCCTGCAT TTGGCTTCAG AAATAAGCAT AAAGATCAGT GGTTGTGTCA CAAATTCCTA TGTATGCTTG ATGGCCTAAA CACATCGCTC TTACCCTGTA GGACATACTT W AAAAAACCCG TATTTGTGTG TTTGTGTAAA CGTGGCTGCC CTCATGAAAC AATAGTGCCT TTTTACTTGT GTCTGCATTC AGAAAATGGG TGTTGCATAA ATGACTCTCA AATGTACAAC ACTGCAAATC GTCTGTTGTT TTTACCATGT TTTTTTAATA TTGCGCACGC TGTCAGCTAA TGGAACAACG GCCTCAGGGA W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
FVB/NJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|
ss51458242 | NES13996266 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | A | T |
SNP Consensus Information | |||||||||||
SNP | Consensus Type | AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
FVB/NJ |
PWD/PhJ |
WSB/EiJ |
||||
rs37931038 | SNP | T | T | T | T | A | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51458242 | NES13996266 | PERLEGEN | MM_PANEL | f | SNP | A/T |
Location: Chr6:143339509 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi18149 | CpG island 18149 | 609 bp proximal | ||||||
Gm67127 | predicted gene, 67127 | within coordinates | ||||||
Rr640842 | regulatory region 640842 | 182 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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