rs37943658 SNP Detail

Summary

• ID
  rs37943658
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70848996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTCGACG TTCCTTTTCC
  CCGTGGAAAC CAGAGTTCTT ATTCCCACTG CAGTCTTTCG GACTGTTCTG ACTACATGTG
  CACATGTGTG TCACTTAGAG TTCTGTTCAG GATCAGAAGT CAAATCACTT TACCCAGCTG
  TTAGTTCTTG GTAATTGCAC AGAAAAGCGC TCTAGATCTT TGGTATTGAG TTTGCTAACC
  R
  GTGTGGCAGA TCCTTCGTTT TAAAATTATG ACGGGGGGGG GGGGGAGAAC AAATAGAGGA
  AATAAATTCA AAATAGCAAG AATTGATACT TCGTTAAATG ACCAAAGAGA AACCCAGGTC
  CCATAATTAG CTTGAAACGC AGAGCAGCGG ATCAGAACGA ATAGCTGCTC CCGGGGACAG
  ATGGGTGGAA TATGGTTATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51674844	NES14816768	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	A	A	A	G	G	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37943658					SNP	A	A	G	A	A	A	A	A	A	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51674844	NES14816768	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70848996 () rs orientation: forward

Symbol	Name	Function Class
Eif2ak3	eukaryotic translation initiation factor 2 alpha kinase 3	within coordinates
Rr399692	regulatory region 399692	215 bp upstream