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rs37964995 SNP Detail
Summary
  • ID
    rs37964995
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr8:45162856 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CGGATCAAAT TTCCCTTAAT
    AGAGTCATGT GTCTAAAAAC GGAGAGAGAG ACGAAGGCAA GTTGGTGTTG CTCAACAAGC
    TCCAAAATAT CACTTAGAAT AATTATTGAT TCCTAAAGCA ATCAAAGTTG TCCATTTCAA
    TGAAATGCTG GCATCTACCA GGATATGTCA AAGGGCCTAA CAGAATAAAG ACAAATATAT
    K
    ATGTAGGTCA GGTTATAGCA GGTCATCCTC TTTGTGGGAG GCAATATTAG CCTCTACTTT
    AAATGAAAGC TCAGAGTGTC ATAGAACACA GCTTAAATAA AGAACAAAGT GAATTTCTAA
    ACTGGACCTT CACTACATTG GGATAATGTC ACCAGCTTGC CACATTGATA TATTTAAGGC
    TTACTTCAGG TCTGAATGGA                                            
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
CAST/EiJ
PWD/PhJ
WSB/EiJ
ss51953169 NES14875927 PERLEGEN MM_PANEL2 f SNP G T T
SNP Consensus Information
SNP Consensus Type
CAST/EiJ
PWD/PhJ
WSB/EiJ
rs37964995 SNP G T T
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss51953169 NES14875927 PERLEGEN MM_PANEL f SNP G/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr8:45162856 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr382009 regulatory region 382009 1577 bp upstream
Rr662787 regulatory region 662787 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory