rs37965875 SNP Detail

Summary

• ID
  rs37965875
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101423294 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGGAATCC TTGCTCTCGT
  GCTGGCTGTG TGTTAACACG TGGGACTGTG AAAATACAGG CATGGAATAC TTCCATCAGA
  GACTACATCT GGGTGTATCC TTGATGAAAC ACAGACAAAC CGCAGCTGAG GGGTACAGGG
  ATGGATGAGA CTGTGGCTCT AGCATCATGG TACACAAGTC ACTCTGGGCT CACAGGTTGG
  W
  GACGGTTAGT GAAGCAGGCA GTTCAGGGAA AGAGTGGCCT TCAGGAGATC AACCTTGGCT
  ATGCTGGTGC GCGCAGGTCT TGGGGACTCC TGAGATCACA TTCTTTTGGG TTAAGAGCTG
  GAGTTCTTTT TCTGGGCCCA AGATGGACCT GAACCATCAG GATTCTATGG AGTGGAGCTG
  GGTCTCTGGT GAGGCACTGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51584387	NES14670623	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37965875					SNP	T	T	T	T	T	T	T	T	T	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51584387	NES14670623	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101423294 () rs orientation: forward

Symbol	Name	Function Class
Gm33162	predicted gene, 33162	within coordinates
Rr582065	regulatory region 582065	1402 bp distal
Rr582066	regulatory region 582066	434 bp proximal
Rr582067	regulatory region 582067	1097 bp proximal