rs37970875 SNP Detail

Summary

• ID
  rs37970875
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60196528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACGCA CACATATATA
  TGTATGTATA TATATACATG TATGACATGT GTGCTGCACT TTTGGGAGTG TGTGGAGAAT
  CTGGGTAGTT CTATTACTTC CCACATCACT TCTCCATTGA GGAATGGGAA TAACTATAAC
  TTTAACAGGG AAGCAAATGC TACCCAGGCA CTTGCCTCGG GGATGGGAAA CACACTGTGT
  Y
  TCAGGCCCAG GAAGCTGGAG AACAAAACAG TAGGAAGAGG GGAAGACTGT GGTGAACTCT
  CAGCCACCAG TCTCCATGAA CAGTTCCAGC ACCATGGAGG CGTGGGCTCC TATTTCCTCC
  CGATATACAC GAGACCTAAT GACTCAGGGC AGCTTATCCA CTCCTGTGCC AAGGCAGGAT
  GGGAACTGAT AGCAGACATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	KK/HlJ
ss50866526	NES14170945	PERLEGEN	MM_PANEL2	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	KK/HlJ
rs37970875					SNP	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50866526	NES14170945	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60196528 () rs orientation: forward

Symbol	Name	Function Class
Cdh23	cadherin related 23 (otocadherin)	within coordinates
Rr228092	regulatory region 228092	74 bp proximal
Vsir	V-set immunoregulatory receptor	within coordinates