rs37972492 SNP Detail

Summary

• ID
  rs37972492
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:135258066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGAGAGCT TGTAGGAGCT
  GGTCCTCTCC TACTGCTGGA GTTCTGGGAA TCCAACTGTC AGGCTGGGCA GCAAGTGCCT
  TTCCCAGTTG GGCCATCCTC CTGATCCTGA ATTGATACGT TCTATGCAGT CTAATCATCT
  ATAGCTATAG AACTGGATAC TCAACCACAT TAGAGGAAAT GAACAGGAGA AGCAAGTCCT
  R
  GTCTGTATTA CCCAGTTTCA TTTTCTCCTC CTCCTCCCTC ATGTCTGCCT TTTATTTCTC
  ATGTTGTTTC TTCTTCTTCC TCTTCCTCTT CTTCTTTTCC TTCTCCTCCT TCTCTTCCTC
  CTCCTCCTCC TTCTCATCTC GATATATCTA AAGATTTAAT TTTAGCACTG TGTGTGTTCT
  TTTAGAACTA CCTCTAATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51651422	NES14650428	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37972492					SNP	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51651422	NES14650428	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135258066 () rs orientation: forward

Symbol	Name	Function Class
Manba	mannosidase, beta A, lysosomal	within coordinates
Tssr31836	transcription start site region 31836	855 bp upstream
Tssr35788	transcription start site region 35788	1835 bp upstream