rs37976936 SNP Detail

Summary

• ID
  rs37976936
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:188754845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAACACTGG GAGACTGTGA
  CCCCTGCTTG GGTGGGACTC TTTGGTGATG CACCTGTTTT AGAATCATTT TAGAAAGCAA
  CCTTTCACAC ATGTTCCTGT ATGTAAGCAA AAATAAAAAT GTCATGGGTT CACCAAGCTG
  GACTTATATA AATAATTTCC TTGTTCTCTC ATGGGTCCCT ACCTTGGGTG AATAGAAGGC
  R
  CTGATAGAGA ATAGGATGAC TAAGTTACAG GGTCAAGGAA CAGGGTGGTA TTTTCAGACA
  CTAACAAAGC TACATGCATG ACCAGCAACA ACACATTATT GGGAGATGAT CCATGGGAAG
  TTGCCCAGTG TTGGTTAAAA GAGCAAAAGT GAGGGAAAGC AAGAATCGCC AATGAGAACA
  GAGGACAGAA ACTCGATGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51419702	NES14448846	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37976936					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51419702	NES14448846	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:188754845 () rs orientation: forward

Symbol	Name	Function Class
Rr425741	regulatory region 425741	680 bp proximal
Rr425742	regulatory region 425742	790 bp proximal