rs37987743 SNP Detail

Summary

• ID
  rs37987743
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149148181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAGCAAT AAGGATCTGA
  TAAGTGTCCC CTGGATACCA TAACCAATCC ACACTCCAAT AACAGTTCCA GGGTCTGGGA
  ACTGTTTAGT GTGGCAGAAA GTCTTCCTGA GAAGCTCTGG GTGTGTGCAG ATGTAGCAGC
  ATCGGATGCT CTCTGATGGT GCAGATCATT TCTCCTCAGG CAGGGTTGCA CATTGCCATG
  R
  CTCCCACTGA ACACTCCCAA AGTTCTGGAC AACTTATTAA CACCCCCTAT AGTATCCTTT
  TAAGATGGAA ATTTATCTTT TAAACTGCAT TCGGTAAAAC CAGCAGAAGG GACTCAGGGG
  GGAATAACAA ACCACTATTA AATACAGCCG TGAGGGTTCT CGGTGCTCAA CATTTTGCTG
  CAAGGCACAC TGAAACGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51052156	NES13892891	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	G	A	G	A	A	A		A	A	G		A
ss321018992	CHEV_3_149105508	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37987743					SNP	G	A	A	A	G	A	G	A	A	A	A	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51052156	NES13892891	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149148181 () rs orientation: forward

Symbol	Name	Function Class
A630039O03Rik	RIKEN cDNA A630039O03 gene	810 bp upstream
Gm30382	predicted gene, 30382	within coordinates