rs37988370 SNP Detail

Summary

• ID
  rs37988370
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65541881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGACTGGG GATGCAGCTC
  AGTGGTGGAG TGTTTGCGTG CACCGAGTCC TGCATTTGAT TCCTACTACT AGAAAAAGAA
  AATTCTACTG ACTGTGTATT TTACATCAGT GCAGAAGACA GACCCCTGTC TCTTCCTGGT
  CAGTAGCTAC CAGGGCTTAT GGCTGCCTGT ACTAGATGGT GCACCTTGGA GATGCAAAAG
  R
  TTAGAAGATG TGGGCGAGGC TAATGAACTT GGGAGGGAAG TAGGGACAAA TACAACAGGT
  TTGGCACGCT GGAAATTCTT TGATGATCCA GGAAATGGTG ATGTTACCAG GACATCAGCT
  CATGCTGCCA AAATGGCAGC TCTGCAGGTG ATTTATTAAG ATGCACAAAT AACCCAACAG
  AATGATCCCA CTTCAATAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss50965412	NES13945822	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37988370					SNP	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50965412	NES13945822	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65541881 () rs orientation: forward

Symbol	Name	Function Class
Rr577715	regulatory region 577715	1602 bp proximal