rs37989282 SNP Detail

Summary

• ID
  rs37989282
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:145531593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGACAGCTT CTACATCTCC
  AAGCAGGTTT ATTAGCAAGT TAATGCAATA TGGTTATTCA GGCACAATAA TGGCCTTGGC
  TGAAATGTCT GTCCCGTTCT TTTTCCCATA CACTTTGGAA TGACTAGAAT GTGACGGCCA
  AGCCTTCGGC CAGCCTCATG AATTTTAAAT CCTCTTTAGA TATAAAAACT GGTTACATGG
  S
  ACATAATCAG CGTGGACAAG GAGCTGGGTG CACAGGATAT CAGGTGTCCT CAAAATAATG
  AGGATTCAGC TTGGCCAGGT GCATTCTGGG TCTTTTCTGC ACGTCCAGCT AATCAGTCAG
  CCGTTGTACT TCTGACATAA GACTTAAACC TCATGTCCGG ACACCTTCTG ATGTCTTGAG
  ACAGCAGTTT TCTTTAGCAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51669788	NES14637735	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37989282					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51669788	NES14637735	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145531593 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ddah1	dimethylarginine dimethylaminohydrolase 1			Intron
				Noncoding-Transcript-Variant
Rr586848	regulatory region 586848			within coordinates
Rr586849	regulatory region 586849			1723 bp proximal
Tssr32303	transcription start site region 32303			1861 bp upstream