rs37993174 SNP Detail

Summary

• ID
  rs37993174
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:59653636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAATGGCAA ATGTGAGGGC
  GGCTCCCAAC ACAGAGAGAC ATACACAGAG ACACACAAAT ACACACAGAC TCACACACAG
  AGACATACAG ACACAGAGAC ACACAGAGAC TCACACACAC ACACACACAC ACACACACAC
  ACACACACAC ACACACACAC TGAAAACCTG TGTAGATAGT CAACTAGTTA AGAATGGTCC
  S
  GTATAGACTG AATTGTCAGT GTTGGTGCAT GTGAGTGTTA AGAGCATAAC TGGGGCTTGA
  TGGTCTAAGA TTATCAGTGT TGACTGTGTG GTGTTCATCA ACTTACTCCA CCTTTCTGAG
  CTACAGACCT GAAATCTCAT AGGGTTGTCA GAAAAAGCAG TCAGGTCCCC AGACCTGTCC
  CCTCCTCCAA GTGACCATTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50896522	NES13490377	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37993174					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50896522	NES13490377	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:59653636 () rs orientation: forward

Symbol	Name	Function Class
D19Mit76	DNA segment, Chr 19, Massachusetts Institute of Technology 76	within coordinates
D19Mit92	DNA segment, Chr 19, Massachusetts Institute of Technology 92	within coordinates
Gm19956	predicted gene, 19956	within coordinates