rs38008517 SNP Detail

Summary

• ID
  rs38008517
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:67702368 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCA CAGAGCGGCT CATACTCCAG
  M
  GAAGTGTACT TCCTTTTGGC TTGAT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	PWD/PhJ	SM/J
ss50874754	NES14165820	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A		A		C
ss147133243	ENSMUSSNP6819523	ENSEMBL	ENSEMBL_Sanger	f	SNP		A					C
ss323348834	CHEV_10_67329286	CHEVERUD	SCREENING_POP	f	SNP									A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	PWD/PhJ	SM/J
rs38008517					SNP	A	A	A	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50874754	NES14165820	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:67702368 () rs orientation: forward

Symbol	Name	Function Class
Rr223271	regulatory region 223271	1746 bp proximal