rs38046257 SNP Detail

Summary

• ID
  rs38046257
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61334930 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACTGAGAAA AGTGTGTCAT TCTCCAAATC TCCCATAGAG
  ATTCTCCGAA TCTCCCATAG AGCGACAGCT ACAATACAAA ACGACCAAAG CAATCAGTGC
  W
  TTGAGGCTCT GAAATAAACA AGCACAGGCT TTGATGATTT CACTGGCGCT GTCTGCTGAC
  AGTGACACAA GCACTCTCCC TTCTCTTTAG CACCATTCA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51490010	NES13960087	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	T	A	T	T	A	A	T	A
ss144742983	ENSMUSSNP2741794	ENSEMBL	ENSEMBL_Sanger	f	SNP		A						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38046257					SNP	A	A	A	A	A	A	A	T	A	T	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51490010	NES13960087	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61334930 () rs orientation: forward

Symbol	Name	Function Class
Gm72252	predicted gene, 72252	1361 bp downstream
Mir344d-1	microRNA 344d-1	1990 bp upstream
Mir344d-2	microRNA 344d-2	90 bp downstream