rs38114713 SNP Detail

Summary

• ID
  rs38114713
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70313661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCCCTGT TAAGATCCAC
  CCTGTGATTG CTGTCTGTTA CAGTTGCTAC TTGCACATCT GTGAAGCCTT GGCCTTATGG
  CTGCAGAGAG AACTGTAGTA GCGAAGATAA ATGAGATTAG TCAGTCCCTC TTGGAAAGAT
  GGTAGAACAG TTGCCAAGTA GCCTCAGCAT GAATGCAGGT CCATTAAGTG TCTGAAACCT
  K
  GCTGGCCAGT CTTAAAGGAC CCATGAATTG TAAGTAAACC TGTTTTAGTT GGTGACACTA
  GACTCAGGGA CCCATCACAG GTGTGAAGCT CCCCCAAAAG CCTCCAGCCT GCTCATCCAG
  ATAGAAATGT GATGGGCACC AGAGGCAAAC GTGAGGGTGG GCCAATCCTG CTTGCCAGTT
  GTGGTTAGTA ATTAGAATTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52027696	NES15045277	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38114713					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52027696	NES15045277	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70313661 () rs orientation: forward

Symbol	Name	Function Class
Ccnb2	cyclin B2	1313 bp downstream
Gm69197	predicted gene, 69197	1321 bp downstream
Mir5626	microRNA 5626	626 bp upstream
Rr204787	regulatory region 204787	1054 bp proximal