rs38195770 SNP Detail

Summary

• ID
  rs38195770
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:123600609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATACATTAT GCCTGCTTCA
  TTATTCATCA TGGTGCAATG AAGCACAATG TTAGAATCTA AGACCAGTTA TTTAATCAGT
  TTTTAGGTTA TCTATTTATT GTAGATCTCT CTATTCCTGA CAATCTTTTG CTAGCATAAT
  GTTAGGATAA TTATCCTTTG TATGTCTAAT TTCCAGTATA TTGCCAAATC AGTAAGATAA
  Y
  GTCTGTATAG AATTAATTTT AATAAATACT ATAAAATATC TGTTCTTATA GTTTGTGGTG
  GTTTGAATAA GAATGGCCCT TGTAGGCTCA TATATTTTAA TGCTTAGTCT TCAGGGAGTG
  GCACTAGTTG AGAGGGATCA GGAGGTGTGG CCATACTGGA GGAAATCTGT CACTGGGGGT
  GGGCTTTGAG GTTTTGGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss51028526	NES13904419	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs38195770					SNP	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51028526	NES13904419	PERLEGEN	MM_PANEL	f	SNP	C/T