rs38269083 SNP Detail

Summary

• ID
  rs38269083
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62318928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTCTCTTG GGAACACTTC
  GGTGACAATT CCTCCCTGCT TGGCACTATT AGTCTCTTGT AGGCAAAAGG CCACCAAATC
  CTGTTGACTG GGAAAGTGCC CTCCTGACTC CTCACCTCTG TCTGTCACCA TGGAAGCCCT
  GGAAAGGTGG GTCATGGTGG CATGTGTCTG TAAACCTTGT ATGACTTTGC CCAGGTTGGG
  R
  CTGAAGCTTT TTGGCCAGGT AGCCTGGTGT GAAACTCTCC CCCCTCCCCC CAGGTTCTCC
  AGGCCTGAAG AGTGACTTCT AAGCAACTTG TCAGCCTTCC TCTTGGCTTC AGCTGTTCCA
  GGCTCACTCT GTGACAGCCG CTGTCCTTCC TGGTGACTTT GGATGGGCTT GGTTTCCCCA
  AGACCTTTCT TTTTCTTTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	WSB/EiJ
ss50718985	NES14253097	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	WSB/EiJ
rs38269083					SNP	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50718985	NES14253097	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62318928 () rs orientation: forward

Symbol	Name	Function Class
Rr196313	regulatory region 196313	1673 bp proximal
Rr201157	regulatory region 201157	473 bp proximal