rs38286741 SNP Detail

Summary

• ID
  rs38286741
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:60986855 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGTGACCT GGGCTCTCTT
  GGGTTTCTGC CTCTCAGTGC TCATCACATG GCCGCAGTCT CATGGCCCTT GATGGCTGCT
  GACCTTCCAA CCATACTCCA CATACTCCAT ACCTGGCAAT AGAATGAAGG AGGTCTCCTG
  GACAAATAAG CTCCGTTAAA GATATCCCAA GTGTCTTGCT GAGTGGCATC GACTGGCTTG
  M
  CACTGACTAT GCTTGGAGGA GGGTCTGGGA AATGCAGATT TTTTAACTGA ACAGATTTTT
  ATCATCCCAT GGAAACTGAG TTCTTCTGAT GAAAGATTAG GGAAATGCAT TCATGGTCAG
  TAGCAAGAAG TCCTTGCTAG AGATAGGTCA GAAGAAGAGT TGTTCAAAGC TTGAGATACA
  AGGTCGAGTG AAGAGGTCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss52025176	NES15041797	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs38286741					SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52025176	NES15041797	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:60986855 () rs orientation: forward

Symbol	Name	Function Class
Rr209953	regulatory region 209953	1547 bp proximal