rs38287031 SNP Detail

Summary

• ID
  rs38287031
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:36791351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTCCTAT AGGCCAAAAG
  GTTTTTTTTT TTTTTTCATT GACAGGTGAT GCAAATGATT ATATAAATTT TCAAGAGATA
  AATGCTTCAT TCTGTCAAGA AAGAAATGCG CAGTACAGGA GGTATATTTT AACCCTGTGA
  CCAAGGCTGC TGAGGTGCTT CCTTCATTGG GGACACGCTT GTCTTGTAGG CCTGCTGTCC
  R
  GAGTTCAGGC TCAGGGACCC TTGCAAAGGC AGAAGGCCTC TTCAAAGTTA CCCTCAGGCT
  CAACAAGTAG GCCGAATTGC ATAAGCCATA ATGAGCACAT TATACGTGAT CATAATAAGA
  ATACTAATAA ACGGGGCCTA GCAAACACAG AAGTGGATGC TCACAGTCAG CTATTGGATA
  GATCACAGGG CTCCCAATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	MOLF/EiJ	WSB/EiJ
ss50779097	NES13544440	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	MOLF/EiJ	WSB/EiJ
rs38287031					SNP	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50779097	NES13544440	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:36791351 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10781	CpG island 10781	1510 bp proximal
Gm56662	predicted gene, 56662	within coordinates
Rr357666	regulatory region 357666	551 bp distal
Rr362011	regulatory region 362011	1665 bp distal