rs38289265 SNP Detail

Summary

• ID
  rs38289265
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:73816484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCC TAAGTTCAAA ATGAGTGGAA
  R
  ATGTGACATA GATTATAAGG CTGAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss51965903	NES14985109	PERLEGEN	MM_PANEL2	f	SNP			A	A	A	A	A	A		G	A	G		A
ss145180398	ENSMUSSNP5642852	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G				A
ss322710276	CHEV_8_75613755	CHEVERUD	SCREENING_POP	f	SNP									A				A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs38289265					SNP	A	G	A	A	A	A	A	A	A	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51965903	NES14985109	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:73816484 () rs orientation: forward

Symbol	Name	Function Class
B930093H17Rik	RIKEN cDNA B930093H17 gene	within coordinates
Large1	LARGE xylosyl- and glucuronyltransferase 1	within coordinates