rs38295523 SNP Detail

Summary

• ID
  rs38295523
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:37181421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTATAAAGA TATTCCATAA
  GATCTGTGAC TCTAGGGAAA CTTGACCAAC ACATGGAGTT ACACAATACA GACAGATTGT
  GACTAACTGG GAACTTGTTG GGCTAGGCAT GTTTGGTGAG GGCAAAATTG AAGCCTGCAC
  ACAGTTGGCA GTATGTCTTG GAGACAGTGG GACTGTCACA CTAACCAGGT TACCACTATA
  Y
  AAGCACCACT TAGCAGCAGA GTAGAGCTGT GGGAATTGAG GTTTTCCCCA GACTGCCTCA
  ACACAACTGC ACTAAACACA GCTCTGATGA GAAAGAGAAT ATTTCTATTC CATAGAAACC
  CTGGTATAAC CTAGACAGTG GCATGCTAGA ACACCGGGAA GACTTTAGAA CAGCACCTCC
  TTCTGGATTC CCCAGAGCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51641617	NES14589893	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38295523					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51641617	NES14589893	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:37181421 () rs orientation: forward

Symbol	Name	Function Class
Gm8664	predicted gene 8664	168 bp downstream