rs38347921 SNP Detail

Summary

• ID
  rs38347921
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:99307049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTCTCTCA GAAGGGATGG
  TGTCTTTGCA GTGTTCCTCC CAGTCCTCTC TCCCAAATTC CAGTTCCATG TGTTTTCTCT
  GATATCTTGA CCCATAAGAT ACCTGCAGTT AAAATAATTC CATTTTATTT CAGCAGAGGG
  CGTTCCTTTC CTTCTGGGAG CATAACCAGC TCTTAGTCAC AGAAGACTAA GACTCTAAAA
  R
  AGGCCGTAAG AATAGTTTCA AAATTGGAAA GGATAGGCTG AGGAGCACTC ATTATCCAAC
  CTGATGACCT CATTTCCTGT GTGGGAATTG CTCAGAATCC CAAGTTCTGT TGAGGCTTAG
  CTAAGAGCTG GAATTTAGAC TACTTACTGT CAACTCAGTG TGTAGCCTCA TGAGTACCCA
  CAGCTCTCAC TGGGCATTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51139935	NES14331065	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs38347921					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51139935	NES14331065	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:99307049 () rs orientation: forward

Symbol	Name	Function Class
Gm41036	predicted gene, 41036	within coordinates