rs38356699 SNP Detail

Summary

• ID
  rs38356699
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:108574155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAATAAACTC TTTCTTCTTT AAATGCCTTG GTCATAGTAT
  CTTATCATAG CAATGGAAAA TCACTAAGAC AGTTGTAGTT TGTGAAGCTC AGATTTTGTT
  K
  TTAGCATTTG GATACAGTCA GCCTTCATTG CCTCTTTGAG CAGAATTTAA AGTCTCATTA
  CGATTTGTGG TTAAGAATGA AGGCTGTAGA GCAACGGAAC                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51047871	NES14372981	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38356699					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047871	NES14372981	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:108574155 () rs orientation: forward

Symbol	Name	Function Class
Evl	Ena-vasodilator stimulated phosphoprotein	Intron
Rr472572	regulatory region 472572	1114 bp distal
Tssr114988	transcription start site region 114988	953 bp downstream