rs38364236 SNP Detail

Summary

• ID
  rs38364236
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:70202173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAACCCTC AGATAAGAGG
  CCCAACTGTG TATAATCCAT GTTTGTTTCC CAATTTTGTT CAATTCTAGA ATCTGGTATT
  CATGAGTGAC CCAGAAGGAT CCTCTGGAGA AATCCATACT AGCCCATACC CTTCAGGCTC
  TGTGCCCAGA CAATCTGTTA GTGGGTTTTT ACAAAGACTA TAGAAAGGCC TCTGCTCTGT
  M
  AGATAATAGA AACTAGTGAA ATGAAATCTG AACATGAGTT AAAAGCTGCT TCCCAGCTCA
  GAGGCCAGAC ATTCGCTGTT GCTCTGCAAT GTGTGAGTGA GTTGTACACT TTGATTTTCT
  GTGGCCATCC TAAGGATCCC GTGAAGAGCA CTCTAGAAAA TGTAGCAGAA AACACAGTTG
  CAAAGCTGTC TTGACTGCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51527953	NES14630766	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	A	A	C	A	A	C	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38364236					SNP	C	A	A	A	A	A	C	A	A	C	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51527953	NES14630766	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70202173 () rs orientation: forward

Symbol	Name	Function Class
Pebp4	phosphatidylethanolamine binding protein 4	within coordinates
Rr300152	regulatory region 300152	429 bp proximal
Rr389823	regulatory region 389823	217 bp upstream