rs38373901 SNP Detail

Summary

• ID
  rs38373901
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:99306753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCCTCTCA CTACTAGGTC
  CCATGGAAAC AGGTAGCATC GGGTAGCAGG TTTCCAGTCC GTAAAACATA ATCTCCACTC
  AAAGTAGCAT AAAGAGTAAA GAGGTGATGT GTCCAAGGTT TGAAAATAAA GGTTACTGAC
  ATAGCATCTC AGTGGGTCCT GACACACTCT TGTCGTGTTC CCACTCTGCC CTCATCCGGC
  R
  CAATTCAAAG TCAGCGGATG GTGACATTTT AAGGGTCACA TCCAGATATT GTGTATGTCC
  AGGGAAAATA AAACCATGCA GAGATTTCTT TCTTCATCTC TCTCAGAAGG GATGGTGTCT
  TTGCAGTGTT CCTCCCAGTC CTCTCTCCCA AATTCCAGTT CCATGTGTTT TCTCTGATAT
  CTTGACCCAT AAGATACCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51139939	NES14331063	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs38373901					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51139939	NES14331063	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:99306753 () rs orientation: forward

Symbol	Name	Function Class
Gm41036	predicted gene, 41036	within coordinates